STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY01586.1Iron complex transport system ATP-binding protein. (286 aa)    
Predicted Functional Partners:
SCY01559.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
SCY01542.1
Iron complex transport system substrate-binding protein.
 
 0.998
SCX86728.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.995
SCX86709.1
Iron complex transport system substrate-binding protein.
  
 0.983
SCY01476.1
Nitrogenase component 1 type Oxidoreductase.
 
     0.867
SCY01503.1
Nitrogenase component 1 type Oxidoreductase.
 
     0.865
SCY01436.1
Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family.
 
     0.766
SCY21392.1
Zinc transport system permease protein.
 
  
 0.650
SCY21432.1
Zinc transport system substrate-binding protein.
 
 
 0.622
SCY01423.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
     0.542
Your Current Organism:
Lachnospiraceae bacterium XPB1003
NCBI taxonomy Id: 1520825
Other names: L. bacterium XPB1003
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