STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY38396.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (228 aa)    
Predicted Functional Partners:
SCY09125.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.860
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.783
SCY38409.1
Barstar, RNAse (barnase) inhibitor.
       0.658
SCY38477.1
Exopolysaccharide biosynthesis protein.
 
     0.642
SCY38437.1
Ribonuclease.
       0.632
SCY38462.1
Hypothetical protein.
       0.603
SCY07119.1
Lipid kinase, YegS/Rv2252/BmrU family.
    
  0.553
SCX84134.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
  0.524
SCX83749.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.500
SCX81268.1
seryl-tRNA synthetase.
    
  0.495
Your Current Organism:
Lachnospiraceae bacterium XPB1003
NCBI taxonomy Id: 1520825
Other names: L. bacterium XPB1003
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