STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY41642.1Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. (355 aa)    
Predicted Functional Partners:
SCY34017.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.824
SCX87700.1
Adenylate cyclase.
   
 
  0.797
SCY41660.1
Acylphosphatase.
       0.773
SCY41691.1
TIGR02452 family protein.
       0.773
SCX89214.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.759
SCY41621.1
Hypothetical protein.
       0.718
SCY41582.1
Protein of unknown function.
       0.583
SCY41598.1
Hypothetical protein.
       0.583
SCX81991.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.565
SCY33260.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
  
  0.489
Your Current Organism:
Lachnospiraceae bacterium XPB1003
NCBI taxonomy Id: 1520825
Other names: L. bacterium XPB1003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.