STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY50296.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (458 aa)    
Predicted Functional Partners:
SCY59938.1
Outer membrane protein TolC.
  
 0.908
SCY72532.1
Hypothetical protein.
  
 0.908
SCY12752.1
Putative ABC transport system permease protein.
 
 
 0.907
SCY12720.1
Putative ABC transport system permease protein.
 
 
 0.905
SCY50279.1
Putative ABC transport system ATP-binding protein.
  
  0.884
SCX90616.1
Putative ABC transport system permease protein.
  
 
 0.863
SCY65857.1
Putative ABC transport system permease protein.
  
 
 0.863
SCY79524.1
Multidrug efflux pump subunit AcrB.
    
 0.805
SCY50254.1
FtsX-like permease family protein.
    
  0.798
SCY12661.1
Putative ABC transport system ATP-binding protein.
 
  0.785
Your Current Organism:
Lachnospiraceae bacterium XBB2008
NCBI taxonomy Id: 1520826
Other names: L. bacterium XBB2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.