STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY63116.1Signal transduction histidine kinase. (923 aa)    
Predicted Functional Partners:
SCY43590.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
0.984
SCY44812.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.976
SCX83510.1
Signal transduction histidine kinase.
 
0.961
SCX82261.1
Hpt domain-containing protein.
 
 0.957
SCX78939.1
Response regulator receiver domain-containing protein.
 
  0.953
SCX88291.1
Signal transduction histidine kinase.
 
0.943
SCY79610.1
Signal transduction histidine kinase.
 
0.938
SCX89850.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
 0.937
SCX89926.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  0.904
SCY26840.1
Signal transduction histidine kinase.
 
 
0.870
Your Current Organism:
Lachnospiraceae bacterium XBB2008
NCBI taxonomy Id: 1520826
Other names: L. bacterium XBB2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.