STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY68790.1Energy-coupling factor transport system permease protein. (239 aa)    
Predicted Functional Partners:
SCY68808.1
Energy-coupling factor transport system ATP-binding protein.
 
 0.991
ecfA
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.972
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.972
SCY68774.1
Energy-coupling factor transport system substrate-specific component.
 
     0.950
SCY02982.1
Energy-coupling factor transport system substrate-specific component.
 
 0.935
SCY55684.1
Biotin transport system substrate-specific component.
  
 0.923
SCX85137.1
Uncharacterized membrane protein.
  
 0.908
SCY02932.1
Energy-coupling factor transport system ATP-binding protein.
 
 0.902
SCY68734.1
ATP-binding cassette, subfamily B.
 
  
  0.896
SCY68753.1
ATP-binding cassette, subfamily B.
 
  
  0.883
Your Current Organism:
Lachnospiraceae bacterium XBB2008
NCBI taxonomy Id: 1520826
Other names: L. bacterium XBB2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.