STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY79565.1CubicO group peptidase, beta-lactamase class C family. (379 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.
       0.757
SCY79540.1
Putative hydrolase of the HAD superfamily.
       0.712
SCY82568.1
Beta-lactamase.
  
     0.692
SCY79524.1
Multidrug efflux pump subunit AcrB.
     
 0.628
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.602
SCY79580.1
A2L zinc ribbon domain-containing protein.
       0.548
SCY79596.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
       0.548
SCY68520.1
beta-N-acetylhexosaminidase.
 
 
  0.534
SCY52587.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
     0.517
SCX90124.1
Hypothetical protein.
  
  
 0.505
Your Current Organism:
Lachnospiraceae bacterium XBB2008
NCBI taxonomy Id: 1520826
Other names: L. bacterium XBB2008
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