STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP96321.1YgiT-type zinc finger domain-containing protein. (76 aa)    
Predicted Functional Partners:
SFP96346.1
Protein of unknown function.
       0.824
SFP96298.1
Integrase/recombinase XerD; Belongs to the 'phage' integrase family.
       0.559
SFP96365.1
Type I restriction enzyme, S subunit.
       0.515
SFP96274.1
Hypothetical protein.
       0.489
Your Current Organism:
Lachnospiraceae bacterium XBB1006
NCBI taxonomy Id: 1520827
Other names: L. bacterium XBB1006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.