STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP97047.1Putative iron-only hydrogenase system regulator. (82 aa)    
Predicted Functional Partners:
SFP96999.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF.
 
   
 0.962
SFP97031.1
Iron-only hydrogenase maturation protein HydE.
 
  
 0.953
SFP97015.1
2-iminoacetate synthase.
 
   
 0.932
SFQ28186.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.904
SFQ47170.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.904
SFQ28169.1
Iron complex transport system substrate-binding protein.
  
 0.882
SFQ47155.1
Iron complex transport system substrate-binding protein.
  
 0.882
SFQ13328.1
Zinc transport system permease protein.
    
 0.453
SFP97066.1
Hypothetical protein.
       0.415
SFQ13279.1
Zinc transport system substrate-binding protein.
  
 
 0.414
Your Current Organism:
Lachnospiraceae bacterium XBB1006
NCBI taxonomy Id: 1520827
Other names: L. bacterium XBB1006
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