STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ24239.1Hypothetical protein. (521 aa)    
Predicted Functional Partners:
SFQ24189.1
UDP-glucose 4-epimerase.
  
 
 0.875
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.870
SFQ24207.1
D-sedoheptulose 7-phosphate isomerase.
  
 
 0.851
SFQ24223.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
    
 0.841
SFQ49822.1
PD-(D/E)XK nuclease family transposase.
  
 0.811
SFQ24170.1
rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
    
 0.787
SFQ24032.1
Glucose-1-phosphate cytidylyltransferase.
  
 0.780
SFQ35051.1
UDP-galactopyranose mutase.
  
 
 0.767
SFQ38823.1
Hypothetical protein.
   
 
 0.761
SFQ24015.1
Nucleoside-diphosphate-sugar epimerase.
  
 
 0.662
Your Current Organism:
Lachnospiraceae bacterium XBB1006
NCBI taxonomy Id: 1520827
Other names: L. bacterium XBB1006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.