Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCW99932.1 | SCX04339.1 | SAMN02910339_00083 | SAMN02910339_00642 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.737 |
SCW99932.1 | SCX04345.1 | SAMN02910339_00083 | SAMN02910339_00643 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | Chromosome partitioning protein. | 0.408 |
SCW99932.1 | SCX10833.1 | SAMN02910339_00083 | SAMN02910339_01532 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | GMP synthase (glutamine-hydrolysing). | 0.462 |
SCW99932.1 | guaA | SAMN02910339_00083 | SAMN02910339_02891 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.462 |
SCX04310.1 | SCX04317.1 | SAMN02910339_00638 | SAMN02910339_00639 | Protein of unknown function. | seryl-tRNA synthetase. | 0.840 |
SCX04310.1 | SCX04324.1 | SAMN02910339_00638 | SAMN02910339_00640 | Protein of unknown function. | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | 0.649 |
SCX04310.1 | SCX04332.1 | SAMN02910339_00638 | SAMN02910339_00641 | Protein of unknown function. | Protein of unknown function. | 0.724 |
SCX04310.1 | SCX04339.1 | SAMN02910339_00638 | SAMN02910339_00642 | Protein of unknown function. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.701 |
SCX04310.1 | SCX04345.1 | SAMN02910339_00638 | SAMN02910339_00643 | Protein of unknown function. | Chromosome partitioning protein. | 0.555 |
SCX04317.1 | SCX04310.1 | SAMN02910339_00639 | SAMN02910339_00638 | seryl-tRNA synthetase. | Protein of unknown function. | 0.840 |
SCX04317.1 | SCX04324.1 | SAMN02910339_00639 | SAMN02910339_00640 | seryl-tRNA synthetase. | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | 0.656 |
SCX04317.1 | SCX04332.1 | SAMN02910339_00639 | SAMN02910339_00641 | seryl-tRNA synthetase. | Protein of unknown function. | 0.654 |
SCX04317.1 | SCX04339.1 | SAMN02910339_00639 | SAMN02910339_00642 | seryl-tRNA synthetase. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.671 |
SCX04317.1 | SCX04345.1 | SAMN02910339_00639 | SAMN02910339_00643 | seryl-tRNA synthetase. | Chromosome partitioning protein. | 0.593 |
SCX04317.1 | SCX10833.1 | SAMN02910339_00639 | SAMN02910339_01532 | seryl-tRNA synthetase. | GMP synthase (glutamine-hydrolysing). | 0.574 |
SCX04317.1 | guaA | SAMN02910339_00639 | SAMN02910339_02891 | seryl-tRNA synthetase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.574 |
SCX04317.1 | rsmG | SAMN02910339_00639 | SAMN02910339_00646 | seryl-tRNA synthetase. | 16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. | 0.462 |
SCX04324.1 | SCX04310.1 | SAMN02910339_00640 | SAMN02910339_00638 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Protein of unknown function. | 0.649 |
SCX04324.1 | SCX04317.1 | SAMN02910339_00640 | SAMN02910339_00639 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | seryl-tRNA synthetase. | 0.656 |
SCX04324.1 | SCX04332.1 | SAMN02910339_00640 | SAMN02910339_00641 | HD-GYP domain, c-di-GMP phosphodiesterase class II (or its inactivated variant). | Protein of unknown function. | 0.758 |
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