STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW12184.1Glycoside/pentoside/hexuronide:cation symporter, GPH family. (467 aa)    
Predicted Functional Partners:
SFW12161.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
    0.834
SFW12171.1
Endo-1,4-beta-xylanase.
       0.786
SFW12195.1
Sialate O-acetylesterase.
 
     0.598
SFW12213.1
acyl-CoA thioester hydrolase.
       0.500
SFW12203.1
Protein of unknown function; Manually curated.
       0.498
SFW12225.1
Phosphoglycolate phosphatase.
       0.498
SFW12234.1
DNA processing protein.
       0.498
ung
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.498
SFW22108.1
Maltose/moltooligosaccharide transporter.
  
     0.442
SFW12260.1
Protein of unknown function.
       0.436
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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