STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW12503.1TonB-linked outer membrane protein, SusC/RagA family. (1063 aa)    
Predicted Functional Partners:
SFW12513.1
Susd and RagB outer membrane lipoprotein.
     0.948
SFW47399.1
TonB-dependent Receptor Plug Domain.
  
 
  0.767
SFW19660.1
Starch-binding associating with outer membrane.
  
     0.746
SFW39567.1
Iron complex outermembrane recepter protein.
  
     0.709
SFW13619.1
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  0.691
SFW13274.1
SusD family protein.
  
     0.676
SFW12523.1
Hypothetical protein.
       0.643
SFW38667.1
Starch-binding associating with outer membrane.
  
     0.639
SFW12490.1
Cellobiose phosphorylase.
       0.634
SFW11849.1
TonB protein C-terminal.
  
  0.632
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.