STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW22428.1Glycosyltransferase WbsX. (386 aa)    
Predicted Functional Partners:
SFW22440.1
Glycosyl transferases group 1.
  
    0.776
SFW22416.1
Polysaccharide pyruvyl transferase.
       0.757
SFW22401.1
Oligosaccharide repeat unit polymerase.
       0.756
SFW22377.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.721
SFW22389.1
Nitroreductase.
       0.716
SFW22364.1
Hypothetical protein.
       0.660
SFW22351.1
Protein involved in polysaccharide export, contains SLBB domain of the beta-grasp fold.
       0.656
mnmE
tRNA modification GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
   
    0.527
SFW22959.1
ppGpp synthetase catalytic domain-containing protein (RelA/SpoT-type nucleotidyltranferase).
   
    0.459
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.