STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW26958.1Putative auto-transporter adhesin, head GIN domain. (231 aa)    
Predicted Functional Partners:
SFW26934.1
Phage shock protein C (PspC) family protein.
  
  
 0.790
SFW26944.1
Hypothetical protein.
       0.678
SFW26908.1
Protein of unknown function.
       0.615
SFW26916.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.615
SFW19468.1
LysM domain-containing protein.
  
 
   0.535
SFW46395.1
Putative ABC transport system permease protein.
  
     0.513
SFW26971.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.490
SFW26981.1
M6 family metalloprotease domain-containing protein.
       0.477
SFW26995.1
M6 family metalloprotease domain-containing protein.
       0.477
SFW11600.1
LysM domain-containing protein.
   
   0.458
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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