STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW27692.1Glycine rich protein. (926 aa)    
Predicted Functional Partners:
SFW27704.1
Fimbrillin-like.
    
  0.669
SFW27715.1
Fimbrillin-like.
    
  0.633
SFW27300.1
Endonuclease/Exonuclease/phosphatase family protein; Manually curated.
  
  0.592
SFW35317.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.567
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.505
SFW26897.1
Tetratricopeptide repeat-containing protein.
  
  0.473
SFW38777.1
Hypothetical protein.
    
  0.462
SFW27725.1
Fimbrillin-like.
      
0.458
SFW47351.1
Tricorn protease C1 domain-containing protein.
   
  0.435
SFW11103.1
Leucine rich repeat-containing protein.
   
  0.435
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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