STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW36148.1Por secretion system C-terminal sorting domain-containing protein. (94 aa)    
Predicted Functional Partners:
SFW36131.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.642
SFW36140.1
L,D-transpeptidase catalytic domain.
       0.613
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.574
SFW36166.1
Lipocalin-like.
       0.571
SFW36121.1
Hypothetical protein.
       0.568
SFW36114.1
Hypothetical protein.
       0.528
SFW36176.1
XTP/dITP diphosphohydrolase.
       0.511
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.