STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW38935.1Autotransporter-associated beta strand repeat-containing protein. (851 aa)    
Predicted Functional Partners:
SFW39033.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
 0.919
SFW38851.1
Beta-xylosidase.
 
  
 0.896
SFW38830.1
Glycosyl hydrolases family 43.
 
  
 0.890
SFW38948.1
Beta-glucosidase.
 
  
 0.885
SFW10804.1
Arabinoxylan arabinofuranohydrolase.
  
 0.882
SFW12161.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
 0.881
SFW38754.1
Glycosyl hydrolase family 67 N-terminus.
  
  0.863
SFW38777.1
Hypothetical protein.
 
 0.847
SFW39758.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase.
 
  
 0.824
SFW17698.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.816
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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