STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW41631.1Outer membrane protein OmpA. (222 aa)    
Predicted Functional Partners:
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
     0.783
SFW41391.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
   0.604
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.577
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.567
SFW35725.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.567
SFW26897.1
Tetratricopeptide repeat-containing protein.
 
  
0.566
SFW40086.1
Chemotaxis protein MotB.
  
0.560
SFW46063.1
WD40-like Beta Propeller Repeat.
   
   0.497
SFW39023.1
WD40-like Beta Propeller Repeat.
   
   0.497
SFW26958.1
Putative auto-transporter adhesin, head GIN domain.
  
 
   0.454
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.