STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_00146Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_001375495_01680
Unannotated protein.
  
 
 0.872
GCA_001375495_00256
Unannotated protein.
  
 
 0.815
GCA_001375495_01815
Unannotated protein.
    
 0.781
GCA_001375495_00772
Unannotated protein.
  
  
 0.609
GCA_001375495_00771
Unannotated protein.
  
  
 0.597
GCA_001375495_00147
Unannotated protein.
       0.559
GCA_001375495_00765
Unannotated protein.
  
 
  0.555
GCA_001375495_00783
Unannotated protein.
  
 
  0.555
GCA_001375495_00784
Unannotated protein.
  
 
  0.555
GCA_001375495_01251
Unannotated protein.
   
 
  0.545
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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