STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_00555Unannotated protein. (1017 aa)    
Predicted Functional Partners:
GCA_001375495_00871
Unannotated protein.
 
 0.999
GCA_001375495_00556
Unannotated protein.
 
  0.986
GCA_001375495_02307
Unannotated protein.
  
 
 0.971
GCA_001375495_00742
Unannotated protein.
 
 0.956
GCA_001375495_01415
Unannotated protein.
 
 0.910
GCA_001375495_00715
Unannotated protein.
 
  
 0.901
GCA_001375495_01432
Unannotated protein.
 
 0.888
GCA_001375495_02177
Unannotated protein.
 
 
 0.886
GCA_001375495_00500
Unannotated protein.
  
  0.872
GCA_001375495_02043
Unannotated protein.
 
  
 0.848
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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