STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_00925Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_001375495_00926
Unannotated protein.
 
   
0.930
GCA_001375495_00496
Unannotated protein.
  
 
 0.850
GCA_001375495_00801
Unannotated protein.
 
   
0.732
GCA_001375495_00927
Unannotated protein.
       0.580
GCA_001375495_00731
Unannotated protein.
 
   
0.514
GCA_001375495_00924
Unannotated protein.
       0.503
GCA_001375495_00730
Unannotated protein.
  
    0.440
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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