STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_01043Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_001375495_01041
Unannotated protein.
 
 
 0.994
GCA_001375495_02139
Unannotated protein.
 
 
 0.987
GCA_001375495_01042
Unannotated protein.
  
 0.977
GCA_001375495_02357
Unannotated protein.
  
 
 0.897
GCA_001375495_01767
Unannotated protein.
    
 0.895
GCA_001375495_00491
Unannotated protein.
  
 
  0.869
GCA_001375495_01963
Unannotated protein.
     
 0.834
GCA_001375495_01046
Unannotated protein.
       0.785
GCA_001375495_01048
Unannotated protein.
 
   
 0.774
GCA_001375495_01045
Unannotated protein.
       0.733
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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