STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_01086Unannotated protein. (776 aa)    
Predicted Functional Partners:
GCA_001375495_01087
Unannotated protein.
      0.949
GCA_001375495_01844
Unannotated protein.
 
  
 0.948
GCA_001375495_01056
Unannotated protein.
     
 0.933
GCA_001375495_00172
Unannotated protein.
 
  
 0.878
GCA_001375495_01084
Unannotated protein.
     
 0.874
GCA_001375495_01340
Unannotated protein.
 
  
 0.873
GCA_001375495_01085
Unannotated protein.
 
     0.871
GCA_001375495_02102
Unannotated protein.
    
  0.823
GCA_001375495_00185
Unannotated protein.
 
  
 0.789
GCA_001375495_01082
Unannotated protein.
     
 0.763
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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