STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_01454Unannotated protein. (89 aa)    
Predicted Functional Partners:
GCA_001375495_01459
Unannotated protein.
   
 
 0.912
GCA_001375495_02062
Unannotated protein.
    
 
 0.898
GCA_001375495_02053
Unannotated protein.
 
 
 
 0.894
GCA_001375495_02061
Unannotated protein.
    
 
 0.879
GCA_001375495_02458
Unannotated protein.
      
 0.827
GCA_001375495_01453
Unannotated protein.
       0.773
GCA_001375495_01455
Unannotated protein.
 
     0.727
GCA_001375495_02066
Unannotated protein.
      
 0.692
GCA_001375495_01456
Unannotated protein.
       0.686
GCA_001375495_01457
Unannotated protein.
       0.686
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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