STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_02215Unannotated protein. (539 aa)    
Predicted Functional Partners:
GCA_001375495_01932
Unannotated protein.
   
  0.932
GCA_001375495_01872
Unannotated protein.
   
  0.931
GCA_001375495_01886
Unannotated protein.
   
  0.930
GCA_001375495_01923
Unannotated protein.
   
  0.930
GCA_001375495_00413
Unannotated protein.
   
  0.911
GCA_001375495_01957
Unannotated protein.
  
 
   0.840
GCA_001375495_00659
Unannotated protein.
   
   0.834
GCA_001375495_01926
Unannotated protein.
   
   0.831
GCA_001375495_02013
Unannotated protein.
   
   0.831
GCA_001375495_01956
Unannotated protein.
   
   0.830
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.