STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_02263Unannotated protein. (305 aa)    
Predicted Functional Partners:
GCA_001375495_02262
Unannotated protein.
 
 
 0.974
GCA_001375495_01668
Unannotated protein.
 
  
 
0.969
GCA_001375495_00260
Unannotated protein.
 
  
 
0.966
GCA_001375495_01133
Unannotated protein.
    
  0.947
GCA_001375495_01797
Unannotated protein.
 
   
 
0.905
GCA_001375495_01496
Unannotated protein.
 
  
 
0.889
GCA_001375495_01874
Unannotated protein.
  
 0.878
GCA_001375495_01216
Unannotated protein.
  
  
  0.851
GCA_001375495_00327
Unannotated protein.
    
 0.827
GCA_001375495_00328
Unannotated protein.
    
 0.827
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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