STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375495_02475Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_001375495_00840
Unannotated protein.
 
   
 0.884
GCA_001375495_02471
Unannotated protein.
  
    0.652
GCA_001375495_01904
Unannotated protein.
 
     0.605
GCA_001375495_00325
Unannotated protein.
  
  
 0.601
GCA_001375495_01785
Unannotated protein.
  
  
 0.579
GCA_001375495_00279
Unannotated protein.
 
  
  0.575
GCA_001375495_02106
Unannotated protein.
   
    0.538
GCA_001375495_00902
Unannotated protein.
   
    0.533
GCA_001375495_01865
Unannotated protein.
  
  
 0.507
GCA_001375495_01526
Unannotated protein.
  
  
 0.477
Your Current Organism:
Flaviflexus massiliensis
NCBI taxonomy Id: 1522309
Other names: F. massiliensis, Flaviflexus sp. SIT4, strain SIT4
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