STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375555_01059Unannotated protein. (354 aa)    
Predicted Functional Partners:
GCA_001375555_01058
Unannotated protein.
 
     0.952
GCA_001375555_01057
Unannotated protein.
     0.896
GCA_001375555_00789
Unannotated protein.
 
 
  0.770
GCA_001375555_01688
Unannotated protein.
   
  0.740
GCA_001375555_02902
Unannotated protein.
   
  0.740
GCA_001375555_01705
Unannotated protein.
    
 
 0.717
GCA_001375555_01384
Unannotated protein.
   
   0.669
GCA_001375555_01519
Unannotated protein.
   
 
 0.665
GCA_001375555_01717
Unannotated protein.
    
 
 0.650
GCA_001375555_02977
Unannotated protein.
    
 
 0.523
Your Current Organism:
Numidum massiliense
NCBI taxonomy Id: 1522315
Other names: CSUR P1305, DSM 29571, N. massiliense, bacterium mt3, strain mt3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.