STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375555_01212Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_001375555_01213
Unannotated protein.
 
  
 0.961
GCA_001375555_01083
Unannotated protein.
  
     0.662
GCA_001375555_01157
Unannotated protein.
  
     0.593
GCA_001375555_01151
Unannotated protein.
  
     0.589
GCA_001375555_01199
Unannotated protein.
 
     0.579
GCA_001375555_01210
Unannotated protein.
 
     0.573
GCA_001375555_01211
Unannotated protein.
 
     0.572
GCA_001375555_01724
Unannotated protein.
  
     0.561
GCA_001375555_03043
Unannotated protein.
  
     0.558
GCA_001375555_01255
Unannotated protein.
  
     0.540
Your Current Organism:
Numidum massiliense
NCBI taxonomy Id: 1522315
Other names: CSUR P1305, DSM 29571, N. massiliense, bacterium mt3, strain mt3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.