STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375555_01945Unannotated protein. (331 aa)    
Predicted Functional Partners:
GCA_001375555_01074
Unannotated protein.
  
 
 0.744
GCA_001375555_02501
Unannotated protein.
  
 
 0.744
GCA_001375555_02990
Unannotated protein.
   
   0.717
GCA_001375555_00861
Unannotated protein.
    
 0.706
GCA_001375555_01283
Unannotated protein.
    
 0.706
GCA_001375555_01241
Unannotated protein.
    
  0.705
GCA_001375555_02992
Unannotated protein.
    
 
 0.689
GCA_001375555_02982
Unannotated protein.
    
   0.687
GCA_001375555_01944
Unannotated protein.
   
   0.684
GCA_001375555_02994
Unannotated protein.
    
   0.675
Your Current Organism:
Numidum massiliense
NCBI taxonomy Id: 1522315
Other names: CSUR P1305, DSM 29571, N. massiliense, bacterium mt3, strain mt3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.