STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_00021Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_000826085_01907
Unannotated protein.
     
 0.905
GCA_000826085_02229
Unannotated protein.
    
 0.865
GCA_000826085_00823
Unannotated protein.
  
 
 0.751
GCA_000826085_01173
Unannotated protein.
  
 
 0.719
GCA_000826085_00022
Unannotated protein.
       0.657
GCA_000826085_00064
Unannotated protein.
      0.611
GCA_000826085_00020
Unannotated protein.
       0.601
GCA_000826085_01493
Unannotated protein.
 
     0.512
GCA_000826085_00018
Unannotated protein.
     
 0.485
GCA_000826085_00019
Unannotated protein.
       0.483
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.