STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_00180Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_000826085_00178
Unannotated protein.
  
 0.995
GCA_000826085_00179
Unannotated protein.
 
  
 0.989
GCA_000826085_00697
Unannotated protein.
    
 0.911
GCA_000826085_00609
Unannotated protein.
 
 
 0.878
GCA_000826085_00177
Unannotated protein.
    
 0.851
GCA_000826085_00338
Unannotated protein.
    
 0.847
GCA_000826085_02216
Unannotated protein.
     
 0.845
GCA_000826085_02505
Unannotated protein.
     
 0.836
GCA_000826085_00954
Unannotated protein.
    
  0.805
GCA_000826085_01302
Unannotated protein.
  
 
 0.754
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.