STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_00791Unannotated protein. (218 aa)    
Predicted Functional Partners:
GCA_000826085_00790
Unannotated protein.
 
 0.999
GCA_000826085_00793
Unannotated protein.
 
 
 0.998
GCA_000826085_00792
Unannotated protein.
 
 
 
0.994
GCA_000826085_02661
Unannotated protein.
    
  0.855
GCA_000826085_00373
Unannotated protein.
  
  
  0.850
GCA_000826085_00976
Unannotated protein.
    
  0.707
GCA_000826085_00375
Unannotated protein.
    
  0.552
GCA_000826085_00829
Unannotated protein.
    
  0.552
GCA_000826085_00897
Unannotated protein.
    
  0.552
GCA_000826085_00905
Unannotated protein.
    
  0.552
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.