STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_00832Unannotated protein. (329 aa)    
Predicted Functional Partners:
GCA_000826085_00830
Unannotated protein.
 
  0.998
GCA_000826085_00904
Unannotated protein.
 
  0.991
GCA_000826085_01364
Unannotated protein.
 
  0.990
GCA_000826085_01529
Unannotated protein.
 
  0.989
GCA_000826085_00376
Unannotated protein.
 
  0.988
GCA_000826085_00898
Unannotated protein.
 
  0.987
GCA_000826085_00829
Unannotated protein.
  0.981
GCA_000826085_02307
Unannotated protein.
 
  0.975
GCA_000826085_00828
Unannotated protein.
 
  0.947
GCA_000826085_01363
Unannotated protein.
  0.916
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.