STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_01779Unannotated protein. (953 aa)    
Predicted Functional Partners:
GCA_000826085_00836
Unannotated protein.
  
 0.997
GCA_000826085_01318
Unannotated protein.
  
 0.992
GCA_000826085_00833
Unannotated protein.
  
 0.943
GCA_000826085_00635
Unannotated protein.
  
 0.921
GCA_000826085_00249
Unannotated protein.
     
 0.851
GCA_000826085_02006
Unannotated protein.
     
 0.851
GCA_000826085_01508
Unannotated protein.
     
 0.846
GCA_000826085_00834
Unannotated protein.
  
  
 0.845
GCA_000826085_01780
Unannotated protein.
     
 0.783
GCA_000826085_01745
Unannotated protein.
  
 
 0.772
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.