STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_02145Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_000826085_02316
Unannotated protein.
 
     0.809
GCA_000826085_02315
Unannotated protein.
 
     0.766
GCA_000826085_01383
Unannotated protein.
  
     0.743
GCA_000826085_01171
Unannotated protein.
 
 
  0.742
GCA_000826085_02152
Unannotated protein.
 
     0.729
GCA_000826085_00281
Unannotated protein.
 
     0.704
GCA_000826085_00365
Unannotated protein.
  
     0.652
GCA_000826085_00628
Unannotated protein.
  
     0.633
GCA_000826085_01351
Unannotated protein.
  
     0.562
GCA_000826085_02146
Unannotated protein.
       0.532
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.