STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_02282Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_000826085_00362
Unannotated protein.
  
     0.729
GCA_000826085_00365
Unannotated protein.
  
     0.654
GCA_000826085_01015
Unannotated protein.
  
    0.637
GCA_000826085_01018
Unannotated protein.
  
     0.589
GCA_000826085_01922
Unannotated protein.
  
     0.580
GCA_000826085_02273
Unannotated protein.
  
     0.578
GCA_000826085_01261
Unannotated protein.
  
     0.570
GCA_000826085_00247
Unannotated protein.
  
     0.563
GCA_000826085_01023
Unannotated protein.
  
     0.563
GCA_000826085_01022
Unannotated protein.
  
     0.560
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.