STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS89420.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (223 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
 0.720
OAS89421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.662
OAS83435.1
16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.629
OAS89419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.628
OAS89418.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.615
OAS89584.1
Ktr system potassium transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.564
OAS86719.1
Ktr system potassium uptake protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.564
OAS87693.1
Ktr system potassium transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.564
OAS83197.1
Fructose-1-phosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
OAS88462.1
Nucleotide excision repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.553
Your Current Organism:
Bacillus litoralis
NCBI taxonomy Id: 152268
Other names: B. litoralis, Bacillus litoralis Yoon and Oh 2005, DSM 16303, KCTC 3898, strain SW-211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.