STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS84030.1Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (370 aa)    
Predicted Functional Partners:
OAS85839.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
OAS87795.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
OAS86884.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.929
OAS89413.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.909
OAS89089.1
Arabinose transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.907
OAS85352.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.905
OAS86825.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.894
OAS89088.1
Arabinose transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.887
OAS82898.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.883
OAS89228.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.882
Your Current Organism:
Bacillus litoralis
NCBI taxonomy Id: 152268
Other names: B. litoralis, Bacillus litoralis Yoon and Oh 2005, DSM 16303, KCTC 3898, strain SW-211
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