STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS82953.1Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
OAS82948.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.838
OAS82950.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.754
OAS82503.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.732
OAS82951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.704
OAS82952.1
alpha-L-fucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.697
OAS86578.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.686
OAS88313.1
PTS mannose transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.686
OAS82954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.668
OAS82955.1
Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.641
OAS82633.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.621
Your Current Organism:
Bacillus litoralis
NCBI taxonomy Id: 152268
Other names: B. litoralis, Bacillus litoralis Yoon and Oh 2005, DSM 16303, KCTC 3898, strain SW-211
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