STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS82064.1Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)    
Predicted Functional Partners:
OAS82065.1
Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
uxaC
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
OAS84740.1
PTS mannitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.903
OAS86578.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.881
OAS88313.1
PTS mannose transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.881
OAS82600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.879
OAS84741.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.879
OAS89361.1
Carbohydrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
OAS88309.1
PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.876
OAS86007.1
Carbohydrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.871
Your Current Organism:
Bacillus litoralis
NCBI taxonomy Id: 152268
Other names: B. litoralis, Bacillus litoralis Yoon and Oh 2005, DSM 16303, KCTC 3898, strain SW-211
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