STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS84255.1Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
OAS84256.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.669
OAS87932.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.599
OAS88306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.578
OAS88304.1
Spore gernimation protein KC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
OAS84253.1
Deoxycytidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
OAS84254.1
Deoxyguanosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.502
OAS85915.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.488
OAS88354.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.475
OAS87621.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.467
OAS89407.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.459
Your Current Organism:
Bacillus litoralis
NCBI taxonomy Id: 152268
Other names: B. litoralis, Bacillus litoralis Yoon and Oh 2005, DSM 16303, KCTC 3898, strain SW-211
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.