STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaC-2ABC transporter ATP-binding protein; Pfam:pfam05494 Toluene tolerance, Ttg2. (197 aa)    
Predicted Functional Partners:
mlaD
ABC transporter periplasmic substrate-binding protein; Pfam:pfam02470 mce related protein.
 
 0.982
mlaB
Anti-sigma B factor antagonist; Pfam:pfam01740 STAS domain.
  
 
 0.938
mlaC
ABC-type transport system, auxiliary component; Pfam:pfam05494 Toluene tolerance, Ttg2.
  
  
 
0.916
mlaE
ABC transporter membrane protein; Pfam:pfam02405 Permease.
 
 
 0.912
mlaF
Pfam:pfam00005 ABC transporter.
 
 
 0.905
ALQ55128.1
Lipid A deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
    0.730
mlaA
Lipoprotein; Pfam:pfam04333 VacJ like lipoprotein.
 
 
 
 0.565
lptD
LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.547
lptC
Lipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
 
    0.533
yggT
Membrane protein; Pfam:pfam02325 YGGT family.
  
     0.520
Your Current Organism:
Pseudoalteromonas issachenkonii
NCBI taxonomy Id: 152297
Other names: CIP 106858, DSM 15925, KCTC 12958, KMM 3549, LMG 19697, LMG:19697, P. issachenkonii, Pseudoalteromonas issachenkonii Ivanova et al. 2002, Pseudoalteromonas sp. F13, Pseudoalteromonas sp. F2, Pseudoalteromonas sp. KMM 3549
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