STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheRChemotaxis protein methyltransferase; Pfam:pfam01739 CheR methyltransferase, SAM binding domain. (276 aa)    
Predicted Functional Partners:
cheV-2
Chemotaxis protein; Pfam:pfam01584 CheW-like domain.
 
 
 0.992
cheA
Chemotaxis protein CheA; Pfam:pfam01584 CheW-like domain.
 
 
 0.974
cheA-2
CheA signal transduction histidine kinase; Pfam:pfam01584 CheW-like domain.
 
 
 0.971
mcp-12
Chemotaxis protein; Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.971
ALQ55193.1
Histidine kinase; Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.967
flgB-2
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.967
mcp
Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.966
mcp-2
Chemotaxis protein; Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.966
mcp-3
Chemotaxis protein; Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.966
mcp-5
Chemotaxis protein; Pfam:pfam00015 Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 0.966
Your Current Organism:
Pseudoalteromonas issachenkonii
NCBI taxonomy Id: 152297
Other names: CIP 106858, DSM 15925, KCTC 12958, KMM 3549, LMG 19697, LMG:19697, P. issachenkonii, Pseudoalteromonas issachenkonii Ivanova et al. 2002, Pseudoalteromonas sp. F13, Pseudoalteromonas sp. F2, Pseudoalteromonas sp. KMM 3549
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