STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcCMetal transporter; Pfam:pfam02321 Outer membrane efflux protein. (385 aa)    
Predicted Functional Partners:
czcB
Cobalt-zinc-cadmium resistance protein; Pfam:pfam12700 HlyD family secretion protein.
 
 0.980
czcA-3
Cobalt-zinc-cadmium resistance protein czcA; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.975
czcB-2
Biotin/lipoyl attachment domain-containing protein; Pfam:pfam12700 HlyD family secretion protein.
 
 0.908
czcA-4
Cation transporter; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.897
cusB-2
Cation efflux system protein; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.868
cusB
Hemolysin D; Pfam:pfam11604 Copper binding periplasmic protein CusF; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.856
czcA-2
CzcA family heavy metal efflux protein; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.793
cusA
Cation efflux system protein cusA; Pfam:pfam00873 AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.793
ALQ56094.1
Substate-binding protein involved in drug resistance; Pfam:pfam12700 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.792
ALQ56335.1
Pfam:pfam00529 HlyD family secretion protein.
  
 0.785
Your Current Organism:
Pseudoalteromonas issachenkonii
NCBI taxonomy Id: 152297
Other names: CIP 106858, DSM 15925, KCTC 12958, KMM 3549, LMG 19697, LMG:19697, P. issachenkonii, Pseudoalteromonas issachenkonii Ivanova et al. 2002, Pseudoalteromonas sp. F13, Pseudoalteromonas sp. F2, Pseudoalteromonas sp. KMM 3549
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.