STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ56380.1Hypothetical protein; Pfam:pfam12680 SnoaL-like domain. (233 aa)    
Predicted Functional Partners:
ALQ56381.1
Hypothetical protein.
       0.799
ALQ53857.1
Signal peptide protein.
  
     0.727
ALQ55126.1
Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
     0.700
tus
Pfam:pfam05472 DNA replication terminus site-binding protein (Ter protein).
  
     0.690
hemDX
Uroporphyrinogen-III synthase; Pfam:pfam04375 HemX.
  
     0.673
damX
Cell division protein DamX; Pfam:pfam13401 AAA domain.
  
     0.665
ALQ53860.1
Hypothetical protein.
  
     0.648
ALQ53880.1
Hypothetical protein.
  
     0.648
ALQ55181.1
Pfam:pfam11143 Protein of unknown function (DUF2919).
  
     0.647
ALQ53507.1
Hypothetical protein; Pfam:pfam00027 Cyclic nucleotide-binding domain.
  
     0.625
Your Current Organism:
Pseudoalteromonas issachenkonii
NCBI taxonomy Id: 152297
Other names: CIP 106858, DSM 15925, KCTC 12958, KMM 3549, LMG 19697, LMG:19697, P. issachenkonii, Pseudoalteromonas issachenkonii Ivanova et al. 2002, Pseudoalteromonas sp. F13, Pseudoalteromonas sp. F2, Pseudoalteromonas sp. KMM 3549
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.