STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALQ56540.1Hypothetical protein; Pfam:pfam13472 GDSL-like Lipase/Acylhydrolase family. (205 aa)    
Predicted Functional Partners:
ALQ56539.1
Hypothetical protein; Pfam:pfam02635 DsrE/DsrF-like family.
       0.792
ALQ56538.1
FMN reductase; Pfam:pfam03358 NADPH-dependent FMN reductase.
       0.767
ALQ55164.1
poly(beta-D-mannuronate) lyase.
  
 
 0.731
ALQ55165.1
Hypothetical protein.
  
 
 0.731
ALQ56522.1
Hypothetical protein.
  
 
 0.731
ALQ54484.1
Hypothetical protein.
  
 
 0.698
soxR
Transcriptional Regulator, MerR family protein; Pfam:pfam09278 MerR, DNA binding.
       0.500
ALQ56168.1
WD-40 repeat-containing G-protein.
     
 0.479
Your Current Organism:
Pseudoalteromonas issachenkonii
NCBI taxonomy Id: 152297
Other names: CIP 106858, DSM 15925, KCTC 12958, KMM 3549, LMG 19697, LMG:19697, P. issachenkonii, Pseudoalteromonas issachenkonii Ivanova et al. 2002, Pseudoalteromonas sp. F13, Pseudoalteromonas sp. F2, Pseudoalteromonas sp. KMM 3549
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.