STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAPeptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (230 aa)    
Predicted Functional Partners:
SAMN05660464_3338
Peptide-methionine (R)-S-oxide reductase.
 
 0.997
SAMN05660464_2293
Thiol-disulfide isomerase or thioredoxin.
   
 0.976
SAMN05660464_1936
Thiol-disulfide isomerase or thioredoxin.
   
 0.973
SAMN05660464_1551
Mycoredoxin.
  
 
 0.930
SAMN05660464_4351
Glutaredoxin.
  
 
 0.878
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.876
SAMN05660464_1886
Glutaredoxin-like domain.
  
 
 0.814
SAMN05660464_3971
PKS_ER domain-containing protein.
       0.561
SAMN05660464_0990
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.560
mca
Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
  
 0.527
Your Current Organism:
Geodermatophilus dictyosporus
NCBI taxonomy Id: 1523247
Other names: ATCC 25080, CBS 234.69, CCUG 62970, DSM 43161, G. dictyosporus, Geodermatophilus dictyosporus Montero-Calasanz et al. 2015 emend. Montero-Calasanz et al. 2017, Geodermatophilus obscurus subsp. dictyosporus, Geodermatophilus sp. DSM 44208, Geodermatophilus sp. G-5, IFO 13317, KCC A-0154, MTCC 11558, NBRC 13317, strain G-5
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