Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APR06634.1 | APR06679.1 | FAM21731_00418 | FAM21731_00466 | Murein DD-endopeptidase MepH precursor. | Exo-glucosaminidase LytG precursor. | 0.453 |
APR06634.1 | APR07472.1 | FAM21731_00418 | FAM21731_01287 | Murein DD-endopeptidase MepH precursor. | Putative endopeptidase p60 precursor. | 0.775 |
APR06634.1 | APR07700.1 | FAM21731_00418 | FAM21731_01526 | Murein DD-endopeptidase MepH precursor. | Peptidoglycan DL-endopeptidase CwlO precursor. | 0.676 |
APR06634.1 | APR08225.1 | FAM21731_00418 | FAM21731_02082 | Murein DD-endopeptidase MepH precursor. | Muramidase-2 precursor. | 0.802 |
APR06679.1 | APR06634.1 | FAM21731_00466 | FAM21731_00418 | Exo-glucosaminidase LytG precursor. | Murein DD-endopeptidase MepH precursor. | 0.453 |
APR07472.1 | APR06634.1 | FAM21731_01287 | FAM21731_00418 | Putative endopeptidase p60 precursor. | Murein DD-endopeptidase MepH precursor. | 0.775 |
APR07472.1 | APR07700.1 | FAM21731_01287 | FAM21731_01526 | Putative endopeptidase p60 precursor. | Peptidoglycan DL-endopeptidase CwlO precursor. | 0.724 |
APR07700.1 | APR06634.1 | FAM21731_01526 | FAM21731_00418 | Peptidoglycan DL-endopeptidase CwlO precursor. | Murein DD-endopeptidase MepH precursor. | 0.676 |
APR07700.1 | APR07472.1 | FAM21731_01526 | FAM21731_01287 | Peptidoglycan DL-endopeptidase CwlO precursor. | Putative endopeptidase p60 precursor. | 0.724 |
APR08225.1 | APR06634.1 | FAM21731_02082 | FAM21731_00418 | Muramidase-2 precursor. | Murein DD-endopeptidase MepH precursor. | 0.802 |